Nextflow workflow report

[lonely_shannon] (resumed run)

Run times

06-Sep-2023 20:25:16 - 06-Sep-2023 22:23:51 (duration: 1h 58m 35s)

  1 succeeded  

  5186 cached  

  0 ignored  

  0 failed  

Nextflow command

nextflow /dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/code/02_SPEAQeasy/SPEAQeasy/main.nf --sample paired --reference hg38 --strand reverse --strand_mode declare --annotation /dcs04/lieber/lcolladotor/annotationFiles_LIBD001/SPEAQeasy/Annotation -with-report /dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/processed-data/02_SPEAQeasy/execution_reports/02-run_pipeline.html -w /dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/processed-data/02_SPEAQeasy/work --input /dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/processed-data/02_SPEAQeasy/ --output /dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/processed-data/02_SPEAQeasy/pipeline_output --experiment living_brain_reanalysis -profile jhpce -resume

CPU-Hours

13'440.4 (100% cached)

Launch directory

/dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/code/02_SPEAQeasy

Work directory

/dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/processed-data/02_SPEAQeasy/work

Project directory

/dcs05/lieber/lcolladotor/living_brain_LIBD001/living_brain_reanalysis/code/02_SPEAQeasy/SPEAQeasy

Script name

main.nf

Script ID

49b4bdd1ef304bae7bf0a9dac5b8e854

Workflow session

ac1a144e-366c-4ac8-9124-94432f7d79d3

Workflow profile

jhpce

Nextflow version

version 20.01.0, build 5264 (12-02-2020 10:14 UTC)